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Expressed sequence tags (ESTs) analysis of Acanthamoeba healyi

Kong HH, Hwang MY, Kim HK, Chung DI

Randomly selected 435 clones from Acanthamoeba healyi cDNA library were sequenced and a total of 387 expressed sequence tags (ESTs) had been generated. Based on the results of BLAST search,...
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Analyses of Expressed Sequence Tags from of Chironomus riparius Using Pyrosequencing : Molecular Ecotoxicology Perspective

Nair PG, Park SY, Choi J

  • KMID: 2380160
  • Environ Health Toxicol.
  • 2011 ;26(1):e2011010.
OBJECTIVES: Chironomus riparius, a non-biting midge (Chironomidae, Diptera), is extensively used as a model organism in aquatic ecotoxicological studies, and considering the potential of C. riparius larvae as a bio-monitoring...
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Expressed Sequence Tags of Trichinella spiralis Muscle Stage Larvae

Park HK, Chang SW, Kang SW, Cho MK, Choi SH, Hong YC, Lee YS, Jeong HJ, Yu HS

In order to obtain greater insight into the relevant genomic expression patterns of Trichinella spiralis, 992 expressed sequence tags (ESTs) were collected from a cDNA library of T. spiralis...
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Expressed sequence tags analysis of Blattella germanica

Chung HS, Yu TH, Kim BJ, Kim SM, Kim JY, Yu HS, Jeong HJ, Ock MS

Four hundred and sixty five randomly selected clones from a cDNA library of Blattella germanica were partially sequenced and searched using BLAST as a means of analyzing the transcribed sequences...
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Characterization of E. coli-induced Genes in Bombyx mori Fatbody using Expressed Sequence Tags Analysis

Park KS, Bae YJ, Kang SJ

  • KMID: 1963272
  • J Bacteriol Virol.
  • 2004 Sep;34(3):239-246.
To accelerate the molecular analysis of specifically induced antibacterial peptide against pathogen (E. coli), cDNA library prepared from the larvae fatbody of Bombyx mori was examined by the expressed sequence...
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Construction of EST Database for Comparative Gene Studies of Acanthamoeba

Moon EK, Kim JO, Xuan YH, Yun YS, Kang SW, Lee YS, Ahn TI, Hong YC, Chung DI, Kong HH

The genus Acanthamoeba can cause severe infections such as granulomatous amebic encephalitis and amebic keratitis in humans. However, little genomic information of Acanthamoeba has been reported. Here, we constructed Acanthamoeba...
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Gene expression profile changes in epithelial ovarian carcinomas using tumor-specific cDNA microarray

Cho HG, Kim JH, Yoo YO, Park DC, Han GT, Lee JM, Kim DH

  • KMID: 2272629
  • Korean J Obstet Gynecol.
  • 2005 Jul;48(7):1708-1721.
To identify new bio-markers as well as potential targets for new drugs for epithelial ovarian cancer (EOC), we compared the gene expression profiles of cancer tissues from 25 EOCs with...
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Expression of BamHI-A Rightward Transcripts in Epstein-Barr Virus-Associated Gastric Cancers

Jang BG, Jung EJ, Kim WH

  • KMID: 2167568
  • Cancer Res Treat.
  • 2011 Dec;43(4):250-254.
PURPOSE: About 10% of all gastric cancers (GCs) are Epstein-Barr virus (EBV)-associated. However, the oncogene of EBV in gastric carcinogenesis has not yet been established. In the present study, we...
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Identification of a Novel Gene by EST Clustering and its Expression in Mouse Ovary and Testis

Hwang SJ, Park CE, Hwang KC, Lee KA

  • KMID: 1979175
  • Korean J Fertil Steril.
  • 2006 Dec;33(4):253-263.
OBJECTIVE: Identification of the regulatory mechanism for arrest and initiation of primordial follicular growth is crucial for female fertility. Previously, we found 15 expressed sequence tags (ESTs) that were specifically...
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Uroplakin mRNA Expression in the Micro-dissected Mouse Prostate

Lee DH, Lee GH

  • KMID: 2298743
  • Korean J Androl.
  • 2010 Aug;28(2):112-117.
PURPOSE: Prostatitis is a common condition with a significant effect on quality of life. Even though the etiology of chronic prostatitis remains unclear, certain bacterial infections may play a major...
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Allergenic Characterization of a Novel Allergen, Homologous to Chymotrypsin, from German Cockroach

Jeong KY, Son M, Lee JH, Hong CS, Park JW

PURPOSE: Cockroach feces are known to be rich in IgE-reactive components. Various protease allergens were identified by proteomic analysis of German cockroach fecal extract in a previous study. In this...
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Expression and Characterization of Genes by Expressed Sequence Tag Analysis in the Rat Thymus during Regeneration following Acute Thymic Involution Induced by Cyclophosphamide

Lee KH, Lee HW, Choi HJ, Min HJ, Baek SY, Yoon S

The thymus is the central lymphoid organ for the development of bone marrow-derived precursor cells into mature T-cells. Understanding the molecular mechanism of thymic involution and regeneration is critical to...
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Identification of Differentially Expressed Radiation-induced Genes in Cervix Carcinoma Cells Using Suppression Subtractive Hybridization

Kim JS, Lee YS, Lee JH, Lee WH, Seo EY, Cho MJ

  • KMID: 2323841
  • J Korean Soc Ther Radiol Oncol.
  • 2005 Mar;23(1):43-50.
PURPOSE: A number of genes and their products are induced early or late following exposure of cells to ionizing radiation. These radiation-induced genes have various effects on irradiated cells and...
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Expressed Sequence Tag Analysis of the Erythrocytic Stage of Plasmodium berghei

Seok JW, Lee YS, Moon EK, Lee JY, Jha BK, Kong HH, Chung DI, Hong Y

Rodent malaria parasites, such as Plasmodium berghei, are practical and useful model organisms for human malaria research because of their analogies to the human malaria in terms of structure, physiology,...
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Expression Profiling of Calcium Induced Genes in Cultured Human Keratinocytes

Lee JS, Kim MR, Kim NS, Kim YS, Yang JM, Cho AY, Lee Y, Kim CD, Lee JH

Terminal differentiation of skin keratinocytes is a vertically directed multi-step process that is tightly controlled by the sequential expression of a variety of genes. To examine the gene expression profile...
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The Differentially Expressed Genes by Radiotherapy in the Patients with Uterine Cervix Cancer

Seo EY, Cho MJ, Lee JH, Lee YS, Na MH, Lee WH, Kim JS, Kim JS

  • KMID: 1613506
  • J Korean Soc Ther Radiol Oncol.
  • 2001 Dec;19(4):389-396.
PURPOSE: To detect differentially expressed genes in the patients with uterine cervical cancer during the radiation therapy. MATERIALS AND METHODS: In patients with biopsy proven uterine cervical cancer, we took...
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Cloning of a Glutathione S-Transferase Decreasing During Differentiation of HL60 Cell Line

Kim JC, Park IK, Lee KB, Sohn SK, Kim MK, Kim JC

  • KMID: 2323722
  • J Korean Soc Ther Radiol Oncol.
  • 1999 Jun;17(2):151-157.
PURPOSE: By sequencing the Expressed Sequence Tags of human dermal papilla cDNA library, we identified a clone named K872 of which the expression decreased during differentiation of HL60 cell line....
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Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis

Lee SH, Joh JH, Lee JS, Lim JH, Kim KY, Yoo YB, Lee CS, Kim BG

The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic...
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Structural analyses of putative porcine cluster of differentiation (CD) 24 gene

Ko H, Chai HH, Jang GW, Park JE, Kim JM, Lee KT

Cluster of differentiation (CD) 24 or heat stable antigen 24 (HSA) molecule is a mucin-type glycoprotein attached to the cell surface by glycosylphosphatidylinositol (GPI)-anchor, promoting adhesive interactions between cells or...
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Survey of the Applications of NGS to Whole-Genome Sequencing and Expression Profiling

Lim JS, Choi BS, Lee JS, Shin C, Yang TJ, Rhee JS, Lee JS, Choi IY

Recently, the technologies of DNA sequence variation and gene expression profiling have been used widely as approaches in the expertise of genome biology and genetics. The application to genome study...
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