World J Mens Health.  2023 Oct;41(4):960-968. 10.5534/wjmh.220190.

Germline DNA-Repair Genes and HOXB13 Mutations in Korean Men with Metastatic Prostate Cancer: Data from a Large Korean Cohort

Affiliations
  • 1Department of Urology, Seoul National University Bundang Hospital, Seongnam, Seoul, Korea
  • 2Department of Urology, Seoul National University College of Medicine, Seoul, Korea
  • 3Procagen, Seoul, Korea
  • 4Department of Medical Device Development, Seoul National University College of Medicine, Seoul, Korea
  • 5Seoul N Urology Clinic, Seongnam, Korea
  • 6Korean Genomics Center, Ulsan National Institute of Science and Technology, Ulsan, Korea
  • 7Clinomics Inc., Ulsan, Korea
  • 8Department of Biomedical Engineering, Ulsan National Institute of Science and Technology College of Information-Bio Convergence Engineering, Ulsan, Korea
  • 9Personal Genomics Institute, Genome Research Foundation, Osong, Korea

Abstract

Purpose
Germline mutations in DNA damage repair (DDR) genes such as BRCA2 have been associated with prostate cancer (PC) risk but has not been thoroughly evaluated for metastatic prostate cancer (mPC) in Asian men. This study attempts to evaluate frequency of DDR mutations in the largest cohort of Koreans.
Materials and Methods
We recruited 340 patients with mPC unselected for family history of cancer and compared to 495 controls. Whole genome sequencing was applied to assess germline pathogenic/likely pathogenic variants (PV/LPVs) in 26 DDR genes and HOXB13, including 7 genes (ATM, BRCA1/2, CHEK2, BRIP1, PALB2, and NBN) associated with hereditary PC. Comparisons to published Caucasian and Japanese cohorts were performed.
Results
Total of 28 PV/LPVs were identified in 30 (8.8%) patients; mutations were found in 13 genes, including BRCA2 (15 men [4.41%]), ATM (2 men [0.59%]), NBN (2 men [0.59%], and BRIP1 (2 men [0.59%]). Only one patient had HOXB13 mutation (0.29%). A lower rate of overall germline variant frequency was observed in Korean mPC compared to Caucasians (8.8% vs. 11.8%), but individual variants notably differed from Caucasian and geographically similar Japanese cohorts. PV/LPVs in DDR genes tended to increase gradually with higher Gleason scores (GS 7, 7.1%; GS 8, 7.5%; GS 9–10, 9.9%).
Conclusions
BRCA2 was the most frequently mutated gene common to different cohorts supporting its importance, but differences in variant distribution in Korean mPC underscore the need for ethnic-specific genetic models. Future ethnic-specific analyses are warranted to verify our findings.

Keyword

Asians; DNA damage; Genetics; Prostatic neoplasms
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