- Post-GWAS Strategies
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Kim S, Bhak J
- KMID: 1450879
- Genomics Inform.
- 2011 Mar;9(1):1-4.
Genome-wide association (GWA) studies are the method of choice for discovering loci associated with common diseases. More than a thousand GWA studies have reported successful identification of statistically significant association... -
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- BioSubroutine: an Open Web Server for Bioinformatics Algorithms and Subroutines
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Lee J, Kim H, Lee W, Chung D, Bhak J
- KMID: 1572619
- Genomics Inform.
- 2005 Mar;3(1):35-38.
We present BioSubroutine, an open depository server that automatically categorizes various subroutines frequently used in bioinformatics research. We processed a large bioinformatics subroutine library called Bio.pl that was the first... -
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- BioCovi: A Visualization Service for Comparative Genomics Analysis
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Lee J, Park D, Bhak J
- KMID: 1572632
- Genomics Inform.
- 2005 Jun;3(2):52-54.
Visualization of the homology information is an important method to analyze the evolutionary and functional meanings of genes. With a database containing model genomes of Homo sapiens, Mus muculus, and... -
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- Biological Object Downloader (BOD) Service for Easy Download and Management of Biological Databases
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Park D, Lee J, Yoon G, Gong S, Bhak J
- KMID: 2166287
- Genomics Inform.
- 2007 Dec;5(4):196-199.
BOD is an FTP service management tool on the Internet. It was developed for biological researchers in South Korea. It enables easier and faster access of bioinformation without having to... -
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- A Clinical Risk Score to Predict In-hospital Mortality from COVID-19 in South Korea
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Her AY, Bhak Y, Jun EJ, Yuan SL, Garg S, Lee S, Bhak J, Shin ES
- KMID: 2515042
- J Korean Med Sci.
- 2021 Apr;36(15):e108.
- doi: 10.3346/jkms.2021.36.e108
Background: Early identification of patients with coronavirus disease 2019 (COVID-19) who are at high risk of mortality is of vital importance for appropriate clinical decision making and delivering optimal treatment.... -
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- Personal Genomics, Bioinformatics, and Variomics
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Bhak J, Ghang H, Reja R, Kim S
- KMID: 2166415
- Genomics Inform.
- 2008 Dec;6(4):161-165.
In 2008 at least five complete genome sequences are available. It is known that there are over 15,000,000 genetic variants, called SNPs, in the dbSNP database. The cost of full... -
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- The Atom of Evolution
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Bhak J, Bolser D, Park D, Cho Y, Yoon K, Lee S, Gong S, Jang I, Park C, Huston M, Choi H
- KMID: 1515373
- Genomics Inform.
- 2004 Dec;2(4):167-173.
The main mechanism of evolution is that biological entities change, are selected, and reproduce. We propose a different concept in terms of the main agent or atom of evolution: in... -
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- HExDB: Human EXon DataBase for Alternative Splicing Pattern Analysis
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Park J, Lee M, Bhak J
- KMID: 1572678
- Genomics Inform.
- 2005 Sep;3(3):80-85.
HExDB is a database for analyzing exon and splicing pattern information in Homo sapiens. HExDB is useful for specific purposes: 1) to design primers for exon amplification from cDNA and... -
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- High Correlation between Alu Elements and the Conversion of 3' UTR of mRNAs Processed Pseudogenes
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An HJ, Na D, Lee D, Lee KH, Bhak J
- KMID: 2166170
- Genomics Inform.
- 2004 Jun;2(2):86-91.
Even though it represents 6 13% of human genomic DNA, Alu sequences are rarely found in coding regions. When in exon region, over 80 % of them are found in... -
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- BioCC: An Openfree Hypertext Bio Community Cluster for Biology
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Gong S, Kim TH, Oh J, Kwon J, Cho SA, Bolser D, Bhak J
- KMID: 1512147
- Genomics Inform.
- 2006 Sep;4(3):125-128.
We present an openfree hypertext (also known as wiki) web cluster called BioCC. BioCC is a novel wiki farm that lets researchers create hundreds of biological web sites. The web... -
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- New Lung Cancer Panel for High-Throughput Targeted Resequencing
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Kim EH, Lee S, Park J, Lee K, Bhak J, Kim BC
- KMID: 2026459
- Genomics Inform.
- 2014 Jun;12(2):50-57.
- doi: 10.5808/GI.2014.12.2.50
We present a new next-generation sequencing-based method to identify somatic mutations of lung cancer. It is a comprehensive mutation profiling protocol to detect somatic mutations in 30 genes found frequently... -
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- Structural Bioinformatics Analysis of Disease-related Mutations
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Park SJ, Oh S, Park D, Bhak J
- KMID: 2166411
- Genomics Inform.
- 2008 Sep;6(3):142-146.
In order to understand the protein functions that are related to disease, it is important to detect the correlation between amino acid mutations and isease. Many mutation studies about disease-related... -
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- How Many SNPs Should Be Used for the Human Phylogeny of Highly Related Ethnicities? A Case of Pan Asian 63 Ethnicities
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Ghang H, Han Y, Jeong S, Bhak J, Lee S, Kim TH, Kim C, Kim S, Al-Mulla F, Youn CH, Yoo HS, The HUGO Pan-Asian SNP Consortium
- KMID: 2053274
- Genomics Inform.
- 2011 Dec;9(4):181-188.
In planning a model-based phylogenic study for highly related ethnic data, the SNP marker number is an important factor to determine for relationship inferences. Genotype frequency data, utilizing a sub... -
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