Cloning and localization of novel stage-specific gene (PKrCb1) of the postnatal rat cerebellum

Kim, Hyun; Kim, Seung Min; Park, Sun Hwa; Kim, Chang Mee; Rhyu, Im Joo; Chun, Yong Hyuck

Abstract

In rat that is helpless at birth, the cerebellum is in a corresponding state of immaturity, and its histogenesis and morphogenesis mainly occur after birth. The times and sites of origin of the four types of cerebellar local-circuit neurons, as well as their migration routes to specific positions in the cortex, their distinctive patterns of differentiation and growth, and their synaptogenesis, have been well studied. The stage-specific genes in the postnatal rat cerebellum may be related with these kind of neural development in the cerebellum. To clone the genes related with neural development in the postnatal cerebellum, developmentally differentially expressed genes were screened from postnatal rat cerebellum with ordered differential display (ODD) and the developmental expression pattern in the postnatal rat cerebella was investigated with in situ hybridization histochemistry. One novel postnatal stage-specific gene (PKrCb1) was cloned by ODD with 7 cDNA pools (P0, P3, P7, P12, P18, P25, adult rat cerebella). To investigate the developmental expression pattern of this novel gene on the cell level, in situ hybridization histochemistry was performed in the developing and adult rat brain sections. The developmental expression pattern of PKrCb1 in the cerebellum was well matched with spatiotemporal migration pattern of granule cells and it may be suspected that PKrCb1 is related with migration of granule cells from external granular layer to internal granular layer. From the results, it is suggested that the methods used in this experiment will be the powerful methods for the cloning and primary function study of the genes related with cerebellar development.