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ORF Miner: a Web-based ORF Search Tool

Park SG, Kim KB

  • KMID: 2166470
  • Genomics Inform.
  • 2009 Dec;7(4):217-219.
The primary clue for locating protein-coding regions is the open reading frame and the determination of ORFs (Open Reading Frames) is the first step toward the gene prediction, especially for...
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Molecular characterization of the feline T-cell receptor gamma alternate reading frame protein (TARP) ortholog

Weiss AT, von Deetzen MC, Hecht W, Reinacher , Gruber AD

  • KMID: 2391992
  • J Vet Sci.
  • 2012 Dec;13(4):345-353.
T-cell receptor gamma alternate reading frame protein (TARP) is expressed by human prostate epithelial, prostate cancer, and mammary cancer cells, but is not found in normal mammary tissue. To date,...
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Protein Expression of the Human Norovirus Capsid Gene using the Baculovirus Expression System

Jin JY, Park CJ, Park SW, Paik SY

Human norovirus (HuNoV) is the major etiological agent of nonbacterial gastroenteritis worldwide. However, due to the absence of a rapid and sensitive diagnostic system, detection and monitoring have been limited....
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A Sequence in Coat Protein Open Reading Frame Is Required for Turnip Yellow Mosaic Virus Replication

Shin HI, Cho TJ

Turnip yellow mosaic virus (TYMV) is a spherical plant virus that has a single 6.3 kb positive strand RNA genome. Information for TYMV replication is limited, except that the 3'-terminal...
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Genetic variations in open reading frame 2 gene of porcine circovirus type 2 isolated in Korea during 2016–2017

Kim K, Choi JY, Lyoo KS, Hahn TW

The capsid protein of porcine circovirus type 2 (PCV2) encoded by open reading frame 2 (ORF2) is important for neutralizing activity against PCV2 infection. This study investigated the heterogeneity of...
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Cloning and Expression of the Gene Encoding the 32-kDa Protein of Rickettsia typhi

Park KH, Hahn MJ, Kim JH

  • KMID: 2001261
  • J Korean Soc Microbiol.
  • 1997 Aug;32(4):399-404.
The crystalline surface layer protein (SLP) and a 28-32 kDa antigen of Rickettsia typhi were known as strong immunogens. We previously reported a cloning and sequence analysis of the SLP...
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Genome Sequencing of Human Cytomegalovirus Strain LCW and Identification of Asia-specific Cluster

Kang JH, Yoon JH, Hwang HR, Lee CH

Human cytomegalovirus (HCMV) is a ubiquitous human pathogen and contains double stranded DNA genome with approximately 230 kbp. Molecular genomic studies of HCMV have been attempted in order to understand...
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Molecular Characterization of a New Hantaan Virus Howang Strain

Chu YK, Lee HW

  • KMID: 2204566
  • J Korean Soc Virol.
  • 1997 Mar;27(1):59-68.
Hantaan virus Howang strain which isolated from the blood of severe case of Korean hemorrhagic fever is more virulent than HTN 76/118 and showed different RFLP from partial PCR amplified...
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Morphological Transformation Region II (mtrII) of Human Cytomegalovirus

Shin YM, Sohn SS, Kang JS, Chang SI, Lee IH

  • KMID: 1906181
  • J Korean Cancer Assoc.
  • 1997 Jun;29(3):495-503.
PURPOSE: Human herpesviruses have been associated with the etiology of several human cancers. The role of these viruses in carcinogenesis has not yet been clarified. This study focused on identifying...
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‘Hummingbird’ Sign in a Patient with Guam Parkinsonism-Dementia Complex

Yeo T, Tan LC

We present a case of a 71-year-old male Chamorro patient from Guam who presented with progressive supranuclear palsy (PSP)-Richardson’s syndrome. Considering his strong family history of parkinsonism and a PSP...
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Characterization of a Potential Pathogenicity Island of Enterotoxigenic Bacteroides fragilis (ETBF) Strains

Chung GT

  • KMID: 1551641
  • J Korean Soc Microbiol.
  • 1998 Jun;33(3):273-280.
Enterotoxigenic B. pagilis (ETBF) strains which produce a 20 kDa zinc metalloprotease toxin (BFI) have been associated with diarrheal disease of animals and young children. Using B. pngilis toxin gene...
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Identification and characterization of atypical porcine pestivirus genomes in newborn piglets with congenital tremor in China

Shen H, Liu X, Zhang P, Wang L, Liu Y, Zhang L, Liang P, Song C

Recently, a novel atypical porcine pestivirus (APPV) in pig was reported. In this study, two APPV strains, APPV-China/GZ01/2016 (GZ01) and APPV-China/GD-SD/2016 (GD-SD), were identified in two newborn piglet herds with...
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Sequence Analysis and Expression of ORF5 in Korean Isolate of Porcine Reproductive and Respiratory Syndrome Virus

Yi SS, Sun JS, Kim HS, Kang SY, Hahn TW

Porcine reproductive and respiratory syndrome virus (PRRSV) is the causative agent of reproductive failure and respiratory disorders in pigs. The viral genome consists of eight overlapping open reading frames (ORFs)....
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Cloning and Sequence Analysis of Gene Encoding an Outer Membrane Protein ( OmpTL ) of Treponema Strain PFB4G Isolated from Periodontitis Patients

Choi BK, Park KK

  • KMID: 1943434
  • J Korean Soc Microbiol.
  • 1999 Apr;34(2):201-209.
Treponema strain PFB4G is a novel oral spirochete and one of the most frequently detected organisms in subgingival plaque samples from rapidly progressive periodontitis and adult periodontitis patients. In this...
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Cloning and Sequencing Analysis of the Gene Encoding the 66-kDa Protein in Borrelia hermsii

Kook YH, Park KH, Lee SH, Kim JH

  • KMID: 2099295
  • J Korean Soc Microbiol.
  • 1998 Oct;33(5):463-473.
The gene encoding the 66 kilodalton (kDa) protein of Borrelia hermsii HS1 was cloned and sequenced. Chromosomal DNA was prepared from purified B. hermsii and used in construction of genomic...
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Expression and localization of human papillomavirus type 16 E6 and E7 open reading frame proteins in human epidermal keratinocyte

Kim KH, Yoon DJ, Moon YA, Kim YS

Over 60 different types of human papillomavirus (HPV) have been identified, and they are classified into high and low risk groups based on the risk for malignant progression of HPV...
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Cloning of Danio rerio toll-like receptor 1

Choi HY

  • KMID: 2036973
  • Korean Lepr Bull.
  • 2005 Dec;38(2):3-14.
Toll-like receptors (TLRs) play a central role of innate immunity as well as of enhancing the adaptive immunity. TLR1 interacts with TLR2 to recognize the mycobacterial 19-kD lipoprotein. Danio rerio...
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Cloning of Novel Ubiquitin Conjugating Enzyme Gene(UBC-dp)

Lee JW, Song KE, Suh JS, Lee WK, Kwon JS, Kim JS, Kim MK, Kim JC

  • KMID: 2039334
  • Korean J Clin Pathol.
  • 1997 Feb;17(1):190-199.
BACKGROUND: A major pathway for protein degradation in eukaryocytes is ubiquitin-dependent. A novel species of plant and mammalian E2 homologous to yeast UBC4/UBC5 is involved in polyubiquitination and degradation of...
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Double-stranded RNA virus in Korean Isolate IH-2 of Trichomonas vaginalis

Kim JW, Chung PR, Hwang MK, Choi EY

In this study, we describe Korean isolates of Trichomonas vaginalis infected with double-stranded (ds) RNA virus (TVV). One T. vaginalis isolate infected with TVV IH-2 evidenced weak pathogenicity in the...
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Cloning and Sequencing of Nonstructural Protein (NSP4) Gene of Bovine Rotavirus Isolated in Korea

Back MS, Kim WY, Kang SY

  • KMID: 1896557
  • J Korean Soc Virol.
  • 2000 Mar;30(1):1-10.
The nonstructural protein NSP4, encoded by gene 10 of rotavirus, has been shown to play a role in viral assembly and known to be an enterotoxin, causing diarrhea in mouse...
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