Psychiatry Investig.  2022 May;19(5):380-385. 10.30773/pi.2021.0395.

Optimization of Analysis of Circadian Rest-Activity Rhythm Using Cosinor Analysis in Mice

• Lee JH
• Moon E
• Park J
• Oh CE
• Hong YR
• Yoon M

• KMID: 2530306
• DOI: http://doi.org/10.30773/pi.2021.0395

Abstract

Objective
Data processing in analysis of circadian rhythm was performed in various ways. However, there was a lack of evidence for the optimal analysis of circadian rest-activity rhythm. Therefore, we aimed to perform mathematical simulations of data processing to investigate proper evidence for the optimal analysis of circadian rest-activity rhythm.
Methods
Locomotor activities of 20 ICR male mice were measured by infrared motion detectors. The data of locomotor activities was processed using data summation, data average, and data moving average methods for cosinor analysis. Circadian indices were estimated according to time block, respectively. Also, statistical F and p-values were calculated by zero-amplitude test.
Results
The data moving average result showed well-fitted cosine curves independent of data processing time. Meanwhile, the amplitude, MESOR, and acrophase were properly estimated within 800 seconds in data summation and data average methods.
Conclusion
These findings suggest that data moving average would be an optimal method for data processing in a cosinor analysis and data average within 800-second data processing time might be adaptable. The results of this study can be helpful to analyze circadian restactivity rhythms and integrate the results of the studies using different data processing methods.

Keyword

Circadian rhythm; Locomotion; Cosinor analysis; Amplitude; Acrophase