Genomics Inform.  2008 Jun;6(2):64-67.

KRDD: Korean Rice Ds-tagging Lines Database for Rice (Oryza sativa L. Dongjin)

• Kim CK
• Lee MC
• Ahn BO
• Yun DW
• Yoon UH
• Suh SC
• Eun MY
• Hahn JH

Abstract

The Korean Rice Ds-tagging lines Database (KRDD) is designed to provide information about Ac/Ds insertion lines and activation tagging lines using japonica rice. This database has provided information on 18,158 Ds lines, which includes the ID, description, photo image, sequence information, and gene characteristics. The KRDD is visualized using a web-based graphical view, and anonymous users can query and browse the data using the search function. It has four major menus of web pages: (i) a Blast Search menu of a mutant line; Blast from rice Ds-tagging mutant lines; (ii) a primer design tool to identify genotypes of Ds insertion lines; (iii) a Phenotype menu for Ds lines, searching by identification name and phenotype characteristics; and (iv) a Management menu for Ds lines.

Keyword

Ac/Ds database; Ds phenotype; Ds-tagging line; insertion line; KRDD

MeSH Terms

Anonyms and Pseudonyms
Genotype
Phenotype