Ann Lab Med.  2024 Jul;44(4):343-353. 10.3343/alm.2023.0337.

TSHR Variant Screening and Phenotype Analysis in 367 Chinese Patients With Congenital Hypothyroidism

Affiliations
  • 1The Core Laboratory in Medical Center of Clinical Research, Department of Molecular Diagnostics & Endocrinology, Shanghai Ninth People’s Hospital, State Key Laboratory of Medical Genomics, Shanghai Jiao Tong University School of Medicine, Shanghai, China
  • 2Department of Endocrine Metabolism, Minhang Hospital, Fudan University, Shanghai, China

Abstract

Background
Genetic defects in the human thyroid-stimulating hormone (TSH) receptor (TSHR) gene can cause congenital hypothyroidism (CH). However, the biological functions and comprehensive genotype–phenotype relationships for most TSHR variants associated with CH remain unexplored. We aimed to identify TSHR variants in Chinese patients with CH, analyze the functions of the variants, and explore the relationships between TSHR genotypes and clinical phenotypes.
Methods
In total, 367 patients with CH were recruited for TSHR variant screening using whole-exome sequencing. The effects of the variants were evaluated by in-silico programs such as SIFT and polyphen2. Furthermore, these variants were transfected into 293T cells to detect their Gs/cyclic AMP and Gq/11 signaling activity.
Results
Among the 367 patients with CH, 17 TSHR variants, including three novel variants, were identified in 45 patients, and 18 patients carried biallelic TSHR variants. In vitro experiments showed that 10 variants were associated with Gs/cyclic AMP and Gq/11 signaling pathway impairment to varying degrees. Patients with TSHR biallelic variants had lower serum TSH levels and higher free triiodothyronine and thyroxine levels at diagnosis than those with DUOX2 biallelic variants.
Conclusions
We found a high frequency of TSHR variants in Chinese patients with CH (12.3%), and 4.9% of cases were caused by TSHR biallelic variants. Ten variants were identified as loss-of-function variants. The data suggest that the clinical phenotype of CH patients caused by TSHR biallelic variants is relatively mild. Our study expands the TSHR variant spectrum and provides further evidence for the elucidation of the genetic etiology of CH.

Keyword

Congenital hypothyroidism; Recessive inheritance; Thyroid-stimulating hormone receptor; Variant; Whole-exome sequencing

Figure

  • Fig. 1 Location of 17 variants in the TSHR protein and conservation analysis of the three novel variants identified in this study. (A) Distribution of 17 TSHR variants identified in the 367 patients with CH. The TSHR comprises seven LRR domains and one (PSD-95/Dlg/ZO-1) PDZ-binding motif (PBM), which is a short linear motif that interacts with a large family of protein–protein interaction domains found in prokaryotes and eukaryotes termed PDZ domains. The upper panel shows a schematic diagram of the TSHR protein sequence, and the lower panel shows a schematic diagram of the corresponding TSHR mRNA sequence. Red font denotes novel variants. (B) Conservation analysis of the three novel variants. Amino acid sequences of the TSHR from various species were downloaded from the NCBI website and aligned using the SnapGene software. The mutated amino acids in all TSHR homologs are indicated using red boxes. Abbreviations: TSHR, thyroid-stimulating hormone receptor; CH, congenital hypothyroidism; LRR, leucine-rich repeat; NCBI, National Centre for Biotechnology Information.

  • Fig. 2 Pedigree analysis, Sanger validation, and thyroid function follow-up of two patients carrying TSHR biallelic variants. (A) Genotypes and pedigrees of two patients with TSHR biallelic variants. Roman numerals indicate generations. Squares denote males, and circles denote females. Gray filling represents individuals carrying p.G132R variants, and black filling denotes individuals carrying p.R450H variants. Arrows indicate the probands. The patients’ parents were euthyroid, with a normal-sized thyroid gland. (B) Sanger sequencing of the patients and their family members. The red boxes denote variants. F represents father, and M represents mother. (C) Long-term follow-up of thyroid function in two patients (CHT558 and CHT573). The red and blue broken lines represent the dynamic changes in serum TSH and FT4 levels, respectively. The two red and blue dotted lines indicate the upper and lower reference intervals of serum TSH and FT4 levels, respectively. Abbreviations: TSH, thyroid-stimulating hormone; TSHR, TSH receptor; FT4, free thyroxine; L-T4, levothyroxine.

  • Fig. 3 Comparison of thyroid function at diagnosis. (A–C) Comparison of serum FT3, FT4, and TSH levels at diagnosis between patients with TSHR biallelic variants and those with the TSHR monoallelic variant. The number of patients carrying TSHR biallelic or monoallelic variants is seven and 18, respectively. (D–F) Comparison of serum FT3, FT4, and TSH levels at diagnosis between patients with biallelic TSHR or DUOX2 variants. The number of patients carrying TSHR or DUOX2 biallelic variants is seven and 81, respectively. The Mann–Whitney U test was used to compare serum FT4 and TSH levels between the two groups, and serum FT3 levels at diagnosis were compared between the two groups using Student’s t-test. *P<0.05, ***P<0.001. Abbreviations: TSH, thyroid-stimulating hormone; TSHR, TSH receptor; FT3, free triiodothyronine; FT4, free thyroxine; ns, no significance.

  • Fig. 4 Signaling properties of WT and 11 TSHR variants. (A) cAMP production in 293T cells. 293T cells were transfected with the respective TSHR expression vectors (WT or mutant) and incubated with or without 10 U/L bTSH. Intracellular cAMP levels were measured using a cAMP assay kit. Student’s t-test was used to compare the cAMP levels between the WT and each variant. (B) Gq/11 signaling in cells expressing the TSHR variants. Gq/11 signaling in cells expressing the TSHR variants was examined indirectly based on firefly luciferase activity in 293T cells. Cells were treated with or without 100 U/L bTSH, and luciferase activity was measured. Student’s t-test was used to compare luciferase activity between the WT and each variant. Data are representative of three independent experiments (each performed in quadruplicate) with similar results, and the values represent the mean±SE. Note that there are no significant differences in the levels of intracellular cAMP and Gq/11 activity between the variants and the WT in the basal state. *P<0.05, **P<0.01, ***P<0.001. Abbreviations: WT, wild-type; TSHR, TSH receptor; bTSH, bovine thyroid-stimulating hormone; FT3, free triiodothyronine; FT4, free thyroxine; ns, no significance.


Reference

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