1. World health organization. Global tuberculosis report. Geneva, Switzerland: World Health Organization;2014.
2. Mehta PK, Raj A, Singh N, Khuller GK. Diagnosis of extrapulmonary tuberculosis by PCR. FEMS Immunol Med Microbiol. 2012; 66:20–36.
Article
3. RNTCP 2014 TB India. Revised national TB control program annual status report. New Delhi: Central TB Division;2014.
4. Mehta PK, Kalra M, Khuller GK, Behera D, Verma I. Development of an ultrasensitive polymerase chain reaction-amplified immunoassay based on Mycobacterial RD antigens: implications for the serodiagnosis of tuberculosis. Diagn Microbiol Infect Dis. 2012; 72:166–174.
Article
5. Makeshkumar V, Madhavan R, Narayanan S. Polymerase chain reaction targeting insertion sequence for the diagnosis of extrapulmonary tuberculosis. Indian J Med Res. 2014; 139:161–166.
6. Chakravorty S, Sen MK, Tyagi JS. Diagnosis of extrapulmonary tuberculosis by smear, culture, and PCR using universal sample processing technology. J Clin Microbiol. 2005; 43:4357–4362.
Article
7. Haldar S, Bose M, Chakrabarti P, Daginawala HF, Harinath BC, Kashyap RS, et al. Improved laboratory diagnosis of tuberculosis--the Indian experience. Tuberculosis (Edinb). 2011; 91:414–426.
8. Negi SS, Anand R, Basir SF, Pasha ST, Gupta S, Khare S, et al. Protein antigen b (Pab) based PCR test in diagnosis of pulmonary and extra-pulmonary tuberculosis. Indian J Med Res. 2006; 124:81–88.
9. Bandyopadhyay D, Gupta S, Banerjee S, Gupta S, Ray D, Bhattacharya S, et al. Adenosine deaminase estimation and multiplex polymerase chain reaction in diagnosis of extra-pulmonary tuberculosis. Int J Tuberc Lung Dis. 2008; 12:1203–1208.
10. Sharma K, Sinha SK, Sharma A, Nada R, Prasad KK, Goyal K, et al. Multiplex PCR for rapid diagnosis of gastrointestinal tuberculosis. J Glob Infect Dis. 2013; 5:49–53.
Article
11. Sharma K, Gupta N, Sharma A, Singh G, Gupta PK, Rajwanshi A, et al. Multiplex polymerase chain reaction using insertion sequence 6110 (IS6110) and Mycobacterial protein fraction from BCG of Rm 0.64 in electrophoresis target genes for diagnosis of tuberculous lymphadenitis. Indian J Med Microbiol. 2013; 31:24–28.
Article
12. Tortoli E, Russo C, Piersimoni C, Mazzola E, Dal Monte P, Pascarella M, et al. Clinical validation of Xpert MTB/RIF for the diagnosis of extrapulmonary tuberculosis. Eur Respir J. 2012; 40:442–447.
Article
13. van Helden PD, Victor TC, Warren RM, van Helden EG. Isolation of DNA from Mycobacterium tubercolosis. Methods Mol Med. 2001; 54:19–30.
14. Srivastava R, Kumar D, Waskar MN, Sharma M, Katoch VM, Srivastava BS. Identification of a repetitive sequence belonging to a PPE gene of Mycobacterium tuberculosis and its use in diagnosis of tuberculosis. J Med Microbiol. 2006; 55(Pt 8):1071–1077.
Article
15. Pai M, Flores LL, Hubbard A, Riley LW, Colford JM Jr. Nucleic acid amplification tests in the diagnosis of tuberculous pleuritis: a systematic review and meta-analysis. BMC Infect Dis. 2004; 4:6.
Article
16. Vadwai V, Shetty A, Rodrigues C. Using likelihood ratios to estimate diagnostic accuracy of a novel multiplex nested PCR in extra-pulmonary tuberculosis. Int J Tuberc Lung Dis. 2012; 16:240–247.
Article
17. Denkinger CM, Schumacher SG, Boehme CC, Dendukuri N, Pai M, Steingart KR. Xpert MTB/RIF assay for the diagnosis of extrapulmonary tuberculosis: a systematic review and meta-analysis. Eur Respir J. 2014; 44:435–446.
Article
18. Sharma K, Sharma A, Sharma SK, Sen RK, Dhillon MS, Sharma M. Does multiplex polymerase chain reaction increase the diagnostic percentage in osteoarticular tuberculosis? A prospective evaluation of 80 cases. Int Orthop. 2012; 36:255–259.
Article
19. Rebollo MJ, San Juan Garrido R, Folgueira D, Palenque E, Díaz-Pedroche C, Lumbreras C, et al. Blood and urine samples as useful sources for the direct detection of tuberculosis by polymerase chain reaction. Diagn Microbiol Infect Dis. 2006; 56:141–146.
Article
20. Varma-Basil M, Kumar S, Arora J, Angrup A, Zozio T, Banavaliker JN, et al. Comparison of spoligotyping, Mycobacterial interspersed repetitive units typing and IS6110-RFLP in a study of genotypic diversity of Mycobacterium tuberculosis in Delhi, North India. Mem Inst Oswaldo Cruz. 2011; 106:524–535.
Article
21. Gupta A, Kulkarni S, Rastogi N, Anupurba S. A study of Mycobacterium tuberculosis genotypic diversity & drug resistance mutations in Varanasi, North India. Indian J Med Res. 2014; 139:892–902.
22. Sankar S, Kuppanan S, Balakrishnan B, Nandagopal B. Analysis of sequence diversity among IS6110 sequence of Mycobacterium tuberculosis: possible implications for PCR based detection. Bioinformation. 2011; 6:283–285.
Article
23. Jin XJ, Kim JM, Kim HK, Kim L, Choi SJ, Park IS, et al. Histopathology and TB-PCR kit analysis in differentiating the diagnosis of intestinal tuberculosis and Crohn's disease. World J Gastroenterol. 2010; 16:2496–2503.
Article
24. Rana T, Singh UB, Kulshrestha V, Kaushik A, Porwal C, Agarwal N, et al. Utility of reverse transcriptase PCR and DNA-PCR in the diagnosis of female genital tuberculosis. J Med Microbiol. 2011; 60(Pt 4):486–491.
Article
25. Balne PK, Modi RR, Choudhury N, Mohan N, Barik MR, Padhi TR, et al. Factors influencing polymerase chain reaction outcomes in patients with clinically suspected ocular tuberculosis. J Ophthalmic Inflamm Infect. 2014; 4:10.
Article
26. Negi SS, Anand R, Pasha ST, Gupta S, Basir SF, Khare S, et al. Diagnostic potential of IS6110, 38kDa, 65kDa and 85B sequence-based polymerase chain reaction in the diagnosis of Mycobacterium tuberculosis in clinical samples. Indian J Med Microbiol. 2007; 25:43–49.
Article
27. Kidane D, Olobo JO, Habte A, Negesse Y, Aseffa A, Abate G, et al. Identification of the causative organism of tuberculous lymphadenitis in ethiopia by PCR. J Clin Microbiol. 2002; 40:4230–4234.
Article
28. Kulkarni S, Vyas S, Supe A, Kadival G. Use of polymerase chain reaction in the diagnosis of abdominal tuberculosis. J Gastroenterol Hepatol. 2006; 21:819–823.
Article
29. Gopinath K, Singh S. Multiplex PCR assay for simultaneous detection and differentiation of Mycobacterium tuberculosis, Mycobacterium avium complexes and other Mycobacterial species directly from clinical specimens. J Appl Microbiol. 2009; 107:425–435.
Article
30. Chia JH, Wu TL, Su LH, Kuo AJ, Lai HC. Direct identification of Mycobacteria from smear-positive sputum samples using an improved multiplex polymerase chain reaction assay. Diagn Microbiol Infect Dis. 2012; 72:340–349.
Article
31. Kim Y, Choi Y, Jeon BY, Jin H, Cho SN, Lee H. A simple and efficient multiplex PCR assay for the identification of Mycobacterium genus and Mycobacterium tuberculosis complex to the species level. Yonsei Med J. 2013; 54:1220–1226.
Article
32. Gey Van Pittius NC, Gamieldien J, Hide W, Brown GD, Siezen RJ, Beyers AD. The ESAT-6 gene cluster of Mycobacterium tuberculosis and other high G+C gram-positive bacteria. Genome Biol. 2001; 2:RESEARCH0044.
33. Uplekar S, Heym B, Friocourt V, Rougemont J, Cole ST. Comparative genomics of esx genes from clinical isolates of Mycobacterium tuberculosis provides evidence for gene conversion and epitope variation. Infect Immun. 2011; 79:4042–4049.
Article
34. Mehta PK, Raj A, Singh NP, Khuller GK. Detection of potential microbial antigens by immuno-PCR (PCR-amplified immunoassay). J Med Microbiol. 2014; 63(Pt 5):627–641.
Article
35. Dubey A, Gwal R, Agrawal S. Mycobacterium tuberculosis detection in blood using multiplex nested polymerase chain reaction. Int J Tuberc Lung Dis. 2013; 17:1341–1345.
Article
36. Elnifro EM, Ashshi AM, Cooper RJ, Klapper PE. Multiplex PCR: optimization and application in diagnostic virology. Clin Microbiol Rev. 2000; 13:559–570.
Article
37. Kulkarni S, Singh P, Memon A, Nataraj G, Kanade S, Kelkar R, et al. An in-house multiplex PCR test for the detection of Mycobacterium tuberculosis, its validation & comparison with a single target TB-PCR kit. Indian J Med Res. 2012; 135:788–794.
38. Sharma SK, Sethi S, Sharma M, Meharwal SK, Katoch VM, Jindal SK, et al. Development and evaluation of a multiplex polymerase chain reaction for the detection of Mycobacterium tuberculosis from pulmonary specimens. Scand J Infect Dis. 2012; 44:739–744.
Article
39. Tang TH, Ahmed SA, Musa M, Zainuddin ZF. Rapid detection of Mycobacterium tuberculosis in clinical samples by multiplex polymerase chain reaction (mPCR). World J Microbiol Biotechnol. 2013; 29:2389–2395.
Article
40. Hallur V, Sharma M, Sethi S, Sharma K, Mewara A, Dhatwalia S, et al. Development and evaluation of multiplex PCR in rapid diagnosis of abdominal tuberculosis. Diagn Microbiol Infect Dis. 2013; 76:51–55.
Article