1). Guan Y, Smith GJ. The emergence and diversification of panzootic H5N1 influenza viruses. Virus Res. 2013; 178:35–43.
Article
2). WHO. H5N1 avian influenza: Timeline of major events. Available at. http://www.who.int/influenza.
3). Empress-watch. FAO Avian influenza A(H5N6): the latest addition to emerging zoonotic avian influenza threats in East and Southeast Asia. 2014; 30:1–6.
4). Li C, Li C, Zhang AJ, To KK, Lee AC, Zhu H, et al. Avian influenza AH7N9 virus induces severe pneumonia in mice without prior adaptation and responds to a combination of Zanamivir and COX-2 inhibitor. PloS One. 2014; 9:e107966.
5). Herfst S, Schrauwen EJ, Linster M, Chutinimitkul S, de Wit E, Munster VJ. Airborne transmission of influenza A/H5N1 virus between ferrets. Science. 2012; 336:1534–41.
Article
6). Cauldwell AV, Long JS, Moncorgé O, Barclay WS. Viral determinants of influenza A virus host range. J Gen Virol. 2014; 95:1193–210.
Article
7). Dugan VG, Chen R, Spiro DJ, Sengamakay N, Zaborsky J, Ghedin E, et al. The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog. 2008; 4:e1000076.
Article
8). Webster RG, Bean WJ, Gorman OT, Chambers TM, Kawaoka Y. Evolution and ecology of influenza A viruses. Microbiol Rev. 1992; 56:152–79.
Article
9). Swayne DE. Understanding the complex pathobiology of high pathogenecity avian influenza viruses in birds. Avian Dis. 2007; 51:242–9.
10). Reperant LA, Rimmelzwaan GF, Kuiken T. Avian influenza viruses in mammals. Rev Sci Tech. 2009; 28:137–59.
Article
11). Joseph U, Su YC, Vijaykrisna D, Smith GJ. The ecology and adaptive evolution of influenza A interspecies transmission. Influenza Other Respir Viruses. 2017; 11:74–84.
Article
12). Fouchier RA, Schneeberger PM, Rozendaal FW, Broekman JM, Kemink SA, Munster V, et al. Avian influenza A virus (H7N7) associated with human conjunctivitis and a fatal case of acute respiratory distress syndrome. Proc Natl Acad Sci U S A. 2004; 101:1356–61.
Article
13). Skowronski DM, Tweed SA, Petric M, Booth T, Li Y, Tam T. Human illness and isolation of low-pathogenicity avian influenza virus of the H7N3 subtype in British Columbia, Canada. J Infect Dis. 2006; 193:899–900.
Article
14). WHO. cumulative number of confirmed human cases of avian influenza A/(H5N1) reported to WHO. 2011.
15). Kuiken T, Holmes EC, McCauley J, Rimmelzwaan GF, Williams CS, Grenfell BT. Host species barriers to influenza virus infections. Science. 2006; 312:394–7.
Article
16). Taubenberger JK, Morens DM. Pandemic influenza-including a risk assessment of H5N1. Rev Sci Tech. 2009; 28:187–202.
17). Wright PF, Neumann G, Kawaoka Y. Orthomyxoviruses. Fields Virology. Knipe DM, Howley PM, editors. Philadelphia: Lippincott, Williams & Wilkins;2007. p. 1691–740.
18). Earn DJ, Dushoff J, Levin SA. Ecology and evolution of the flu. Trends Ecol Evol. 2002; 17:334–40.
Article
19). Neumann G, Noda T, Kawaoka Y. Emergence and pandemic potential of swine-origin H1N1 influenza virus. Nature. 2009; 459:931–9.
Article
20). Van Riel D, den Bakker MA, Leijten LM, Chutinimitkul S, Munster VJ, de Wit E, et al. Seasonal and pandemic human influenza viruses attach better to human upper respiratory tract epithelium than avian influenza viruses. Am J Pathol. 2010; 176:1614–8.
Article
21). Shinya K, Ebina M, Yamada S, Ono M, Kasai N, Kawaoka Y. Avian flu: influenza virus receptors in the human airway. Nature. 2006; 440:435–6.
22). Resa-Infante P, Jorba N, Coloma R, Ortin J. The influenza virus RNA synthesis machine: advances in its structure and function. RNA Biol. 2011; 8:207–15.
23). Perez DR, Webby RJ, Hoffmann E, Webster RG. Land-based birds as potential disseminators of avian mammalian reassortant influenza A viruses. Avian Dis. 2003; 47:1114–7.
24). Campitelli L, Mogavero E, De Marco MA, Delogu M, Puzelli S, Frezza F, et al. Interspecies transmission of an H7N3 influenza virus from wild birds to intensively reared domestic poultry in Italy. Virology. 2004; 323:24–36.
Article
25). Wasilenko JL, Lee CW, Sarmento L, Spackman E, Kapczynski DR, Suarez DL, et al. NP, PB1, and PB2 viral genes contribute to altered replication of H5N1 avian influenza viruses in chickens. J Virol. 2008; 82:4544–53.
Article
26). Blok J, Air GM. Variation in the membrane-insertion and "stalk" sequences in eight subtypes of influenza type A virus neuraminidase. Biochemistry. 1982; 21:4001–7.
Article
27). Landolt GA, Olsen CW. Up to new tricks-a review of cross-species transmission of influenza A viruses. Anim Health Res Rev. 2007; 8:1–21.
28). Taubenberger JK, Reid AH, Janczewski TA, Fanning TG. Integrating historical, clinical and molecular genetic data in order to explain the origin and virulence of the 1918 Spanish influenza virus. Philos Trans R Soc Lond B Biol Sci. 2001; 356:1829–39.
Article
29). Olsen CW. The emergence of novel swine influenza viruses in North America. Virus Res. 2002; 85:199–210.
Article
30). Dunham EJ, Dugan VG, Kaser EK, Perkins SE, Brown IH, Holmes EC, et al. Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses. J Virol. 2009; 83:5485–94.
Article
31). Nicolls JM, Bourne AJ, Chen H, Guan Y, Peiris JS. Sialic acid receptor detection in the human respiratory tract: evidence for widespread distribution of potential binding sites for human and avian influenza viruses. Respir Res. 2007; 8:73.
Article
32). Horimoto T, Kawaoka Y. Pandemic threat posed by avian influenza A viruses. Clin Microbiol Rev. 2001; 14:129–49.
Article
33). Qi L, Davis AS, Jagger BW, Schwartzman LM, Dunham EJ, Kash JC, et al. Analysis by single-gene reassortment demonstrates that the 1918 influenza virus is functionally compatible with a low-pathogenicity avian influenza virus in mice. J Virol. 2012; 86:9211–20.
Article
34). Morens DM, Taubenberger JK, Fauci AS. Predominant role of bacterial pneumonia as a cause of death in pandemic influenza: implications for pandemic influenza preparedness. J Infect Dis. 2008; 198:962–70.
Article
35). Morens DM, Taubenberger JK, Fauci AS. The persistent legacy of the 1918 influenza virus. N Engl J Med. 2009; 361:225–9.
Article
36). Kawaoka Y, Krauss S, Webster RG. Avian-to-human transmission of the PB1 gene of influenza A viruses in the 1957 and 1968 pandemics. J Virol. 1989; 63:4603–8.
Article
37). Garten RJ, Davis CT, Russell CA, Shu B, Lindstrom S, Balish A, et al. Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science. 2009; 325:197–201.
38). Peiris JS, de Jong MD, Guan Y. Avian influenza virus (H5N1): a threat to human health. Clin Microbiol Rev. 2007; 20:243–67.
Article
39). Tweed SA, Skowronski DM, David ST, Larder A, Petric M, Lees W, et al. Human illness from avian influenza H7N3, British Columbia. Emerg Infect Dis. 2004; 10:2196–9.
Article
40). Lin YP, Shaw M, Gregory V, Cameron K, Lim W, Klimov A, et al. Avian-to human transmission of H9N2 subtype influenza A viruses: relationship between H9N2 and H5N1 human isolates. Proc Natl Acad Sci U S A. 2000; 97:9654–8.
41). Claes F, Morzaria SP, Donis RO. Emergence and dissemination of clade 2.3.4.4 H5Nx influenza viruses-how is the Asian HPAI H5 lineage maintained. Curr Opin Virol. 2016; 16:158–63.
42). Subbarao K, Klimov A, Katz J, Regnery H, Lim W, Hall H, et al. Characterization of an avian influenza A (H5N1) virus isolated from a child with a fatal respiratory illness. Science. 1998; 279:393–6.
Article
43). Yang L, Zhu W, Li X, Bo H, Zhang Y, Gao R, et al. Genesis and dissemination of highly pathogenic H5N6 avian influenza viruses. J Virol. 2016.
Article
44). Chen R, Holmes EC. Avian influenza virus exhibits rapid evolutionary dynamics. Mol Biol Evol. 2006; 23:2336–41.
Article
45). Claas EC, de Jong JC, van Beek R, Rimmelzwaan GF, Osterhaus AD. Human influenza virus A/HongKong/156/97 (H5N1) infection. Vaccine. 1998; 16:977–8.
Article
46). Alexander DJ. An overview of the epidemiology of avian influenza. Vaccine. 2007; 25:5637–44.
Article
47). Matrosovich MN, Krauss S, Webster RG. H9N2 influenza A viruses from poultry in Asia have human virus-like receptor specificity. Virology. 2001; 281:156–62.
Article
48). Myers KP, Olsen CW, Gray GC. Cases of swine influenza in humans: a review of the literature. Clin Infect Dis. 2007; 44:1084–8.
Article
49). Shinde S, Bridges CB, Uyeki TM, Shu B, Balish A, Xu X, et al. Triple-reassortant swine influenza A (H1) in humans in the United states, 2005–2009. N Engl J Med. 2009; 360:2616–25.
Article
50). Van Reeth K, Nicoll A. A human case of swine influenza virus infection in Europe-implications for human health and research. Euro Surveill. 2009; 14.
Article
51). Rabadan R, Levine AJ, Robins H. Comparison of avian and human influenza A viruses reveals a mutational bias on the viral genomes. J Virol. 2006; 80:11887–91.
Article
52). Zaraket H, Bridges OA, Russell CJ. The pH of activation of the hemagglutinin protein regulates H5N1 influenza virus replication and pathogenesis in mice. J Virol. 2013; 87:1826–34.
Article
53). Matrosovich M, Stech J, Klenk HD. Influenza receptors, polymerase and host range. Rev Sci Tech. 2009; 28:203–17.
Article
54). Qi L, Kash JC, Dugan VG, Wang R, Jin G, Cunningham RE, et al. Role of sialic acid binding specificity of the 1918 influenza virus hemagglutinin protein in virulence and pathogenesis for mice. J Virol. 2009; 83:3754–61.
Article
55). Tumpey TM, Maines TR, Van Hoeven N, Glaser L, Solórzano A, Pappas C, et al. A two-amino acid change in the hemagglutinin of the 1918 influenza virus abolishes transmission. Science. 2007; 315:655–9.
Article
56). Kash JC, Tumpey TM, Proll SC, Carter V, Perwitasari O, Thomas MJ, et al. Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus. Nature. 2006; 443:578–81.
Article
57). Ayllon J, Russell RJ, Garcia-Sastre A, Hale BG. Contribution of NS1 effector domain dimerization to influenza A virus replication and virulence. J Virol. 2012; 86:13095–8.
Article
58). Moncorgé O, Mura M, Barclay WS. Evidence for avian and human host cell factors that affect the activity of influenza virus polymerase. J Virol. 2010; 84:9978–86.
Article
59). Ping J, Keleta I, Forbes NF, Dankar S, Stecho W, Tyler S, et al. Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse. PLoS One. 2011; 6:e21740.
Article
60). Hatta M, Hatta Y, Kim JH, Watanabe S, Shinya K, Nguyen T, et al. Growth of H5N1 influenza A viruses in the upper respiratory tract of mice. PLoS Pathog. 2007; 3:1374–9.
61). Cauldwell AV, Moncorgé O, Barclay WS. Unstable polymerasenucleoprotein interaction is not responsible for avian influenza virus polymerase restriction in human cells. J Virol. 2013; 87:1278–84.
Article
62). Massin P, van der Werf S, Naffakh N. Residue 627 of PB2 is a determinant of cold sensitivity in RNA replication of avian influenza viruses. J Virol. 2001; 75:5398–404.
63). Mehle A, Doudna JA. Adaptive strategies of the influenza virus polymerase for replication in humans. Proc Natl Acad Sci U S A. 2009; 106:21312–6.
Article
64). Bortz E, Westera L, Maamary J, Steel J, Albrecht RA, Manicassamy B, et al. Hostand strain-specific regulation of influenza virus polymerase activity by interacting cellular proteins. MBio. 2011; 2:e00151–11.
Article
65). Xu C, Hu WB, Xu K, He YX, Wang TY, Chen Z, et al. Amino acids 473V and 598P of PB1 from an avian-origin influenza A virus contribute to polymerase activity, especially in mammalian cells. J Gen Virol. 2012; 93:531–40.
Article
66). Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Zaslavsky L, Tatusova T, et al. The influenza virus resource at the National Center for Biotechnology Information. J Virol. 2008; 82:596–601.
Article
67). Gabriel G, Dauber B, Wolff T, Planz O, Klenk HD, Stech J. The viral polymerase mediates adaptation of an avian influenza virus to a mammalian host. Proc Natl Acad Sci U S A. 2005; 102:18590–5.
Article
68). Ilyushina NA, Khalenkov AM, Seiler JP, Forrest HL, Bovin NV, Marijuki H, et al. Adaptation of pandemic H1N1 influenza viruses in mice. J Virol. 2010; 84:8607–16.
Article
69). Mänz B, Brunotte L, Reuther P, Schwemmle M. Adaptive mutations in NEP compensate for defective H5N1 RNA replication in cultured human cells. Nat Commun. 2012; 3:802.
Article
70). Mänz B, Schwemmle M, Brunotte L. Adaptation of avian influenza A virus polymerase in mammals to overcome the host species barrier. J Virol. 2013; 87:7200–9.
71). Bi Y, Mei K, Shi W, Liu D, Yu X, Gao Z, et al. Two novel reassortants of avian influenza A (H5N6) virus in China. J Gen Virol. 2015; 96:975–81.
Article