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Molecular Typing of Cryptococcus neoformans Isolated from Korean Patients

Park SH, Cho SI, Hwang SM

Cyptococcosis is generally caused by Cryptococcus neoformans, the opportunistic agent which has two species such as C. neoformans and C. gattii. Both C. neoformans and C. gattii species contain a...
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Genospecies Classification of Acinetobacter calcoaceticus-Acinetobacter baumannii Complex by Restriction Fragment Length Polymorphism

Lim HS, Hong HJ, Jo HJ, Kim DH, Chang KS

Acinetobacter calcoaceticus-Acinetobacter baumannii (A. calcoaceticus-A. baumannii) complex, which includes A. calcoaceticus (genospecies 1), A. baumannii (genospecies 2), Acinetobacter genospecies 3 and 13, has been identified as A. baumannii by automated...
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Molecular Markers for Identification of Stellantchasmus falcatus and a Phylogenic Study using the HAT-RAPD Method

Wongsawad , Wongsawad

Stellantchasmus falcatus is a minute intestinal fluke in the family Heterophyidae. Metacercariae, the infective stage, were reported in a marine fish, mullet Liza subviridis, and a fresh water fish, Dermogenus...
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Mycelial Propagation and Molecular Phylogenetic Relationships of Commercially Cultivated Agrocybe cylindracea based on ITS Sequences and RAPD

Alam N, Kim JH, Shim MJ, Lee UY, Lee TS

  • KMID: 2312572
  • Mycobiology.
  • 2010 Jun;38(2):89-96.
This study evaluated the optimal vegetative growth conditions and molecular phylogenetic relationships of eleven strains of Agrocybe cylindracea collected from different ecological regions of Korea, China and Taiwan. The optimal...
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Cultural Conditions for Mycelial Growth and Molecular Phylogenetic Relationship in Different Wild Strains of Schizophyllum commune

Alam N, Cha YJ, Shim MJ, Lee TS, Lee UY

  • KMID: 2312559
  • Mycobiology.
  • 2010 Mar;38(1):17-25.
The common split-gilled mushroom, Schizophyllum commune is found throughout the world on woody plants. This study was initiated to evaluate conditions for favorable vegetative growth and to determine molecular phylogenetic...
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Vegetative Growth and Phylogenetic Relationship of Commercially Cultivated Strains of Pleurotus eryngii based on ITS sequence and RAPD

Alam N, Shim MJ, Lee MW, Shin PG, Yoo YB, Lee TS

Pleurotus eryngii, known as king oyster mushroom has been widely used for nutritional and medicinal purposes. This study was initiated to screen the suitable conditions for mycelial growth and to...
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Chinese Cabbage Clubroot Pathogen, Plasmodiophora brassicae, Is Genetically Stable

Heo SH, Jang SJ, Choi JS, Jang CS, Song JY, Kim HG

Single spore isolates of Plasmodiophora brassicae e4 and e9 obtained from diseased Chinese cabbage were identified as race 4 and race 9, respectively, by the Williams' differential variety set. To...
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Phylogenetic Relationship in Different Commercial Strains of Pleurotus nebrodensis Based on ITS Sequence and RAPD

Alam N, Shim MJ, Lee MW, Shin PG, Yoo YB, Lee TS

The molecular phylogeny in nine different commercial cultivated strains of Pleurotus nebrodensis was studied based on their internal transcribed spacer (ITS) region and RAPD. In the sequence of ITS region...
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Optimal Conditions for the Mycelial Growth of Coprinus comatus Strains

Jang MJ, Lee YH, Liu JJ, Ju YC

  • KMID: 2408779
  • Mycobiology.
  • 2009 Jun;37(2):103-108.
The principal objective of this study was to acquire basic data regarding the mycelial growth characteristics for the artificial cultivation of Coprinus comatus. 12 URP primers were employed to evaluate...
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MushBase: A Mushroom Information Database Application

Le VQ, Lee HS, Ro HS

A database application, namely MushBase, has been built based on Microsoft Access in order to store and manage different kinds of data about mushroom biological information of species, strains and...
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Diversity of swine Bordetella bronchiseptica isolates evaluated by RAPD analysis and PFGE

Shin EK, Seo YS, Han JH, Hahn TW

The degree of genetic diversity in 45 Bordetella (B.) bronchiseptica strains comprised of a vaccine strain (N = 1), reference strains (N = 3) and field isolates (N = 41)...
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Random amplified polymorphic DNA (RAPD) analysis of Mycobacterium tuberculosis strains in India

Singh JP, Verma R, Chaudhuri

The usefulness of random amplification of polymorphic DNA (RAPD) analysis for typing Indian strains of M. tuberculosis was investigated. M. tuberculosis H37Rv, M. tuberculosis DT and 42 clinical isolates of M. tuberculosis were subjected...
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Isolation and Characterization of Cryptococcus neoformans from Environmental Sources in Busan

Oh KS, Hwang SM

  • KMID: 2312467
  • Mycobiology.
  • 2005 Dec;33(4):188-193.
Twenty nine samples of pigeon droppings (n = 12) and soil contaminated with avian excreta (n = 19), collected from different sites in Busan, were examined for isolation and characterization...
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Antibiotic Resistance and Genetic Analysis of Shigella sonnei Strains Isolated in South Korea and Japan

Kim YB, Moon JY, Lee BK

  • KMID: 1574113
  • J Bacteriol Virol.
  • 2005 Jun;35(2):93-102.
A total of 35 strains of Shigella sonnei, 21 strains isolated in South Korea from 2000 to 2001 and 14 strains isolated in Japan from 2001 and 2002 were analyzed...
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Genotyping and Adherence to HeLa Cells of eae Positive Enteropathogenic Escherichia coli Isolated from Neonates

Lee EJ, Moon JY, Kim YB

  • KMID: 2168477
  • J Bacteriol Virol.
  • 2005 Mar;35(1):11-21.
Enteropathogenic Escherichia coli (EPEC) strains possess genes for attaching and effacing (eae) and EPEC adherence factor (EAF) plasmid. It is necessary to develop molecular techniques for the evaluation of EPEC...
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Isolation and identification of Escherichia coli O157:H7 using different detection methods and molecular determination by multiplex PCR and RAPD

Kim JY, Kim SH, Kwon NH, Bae WK, Lim JY, Koo HC, Kim JM, Noh KM, Jung WK, Park KT, Park YH

  • KMID: 1106069
  • J Vet Sci.
  • 2005 Mar;6(1):7-19.
Escherichia coli O157:H7 is recognized as a significant food-borne pathogen, so rapid identification is important for food hygiene management and prompt epidemiological investigations. The limited prevalence data on Shiga toxin-producing...
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VIM-2 Type Metallo-beta-lactamase Producing Achromobacter xylosoxidans subsp. xylosoxidans Isolated from Urine Specimens

Shin KS, Lee J, Kim BC

  • KMID: 2285098
  • Infect Chemother.
  • 2005 Feb;37(1):22-28.
BACKGROUND: The dissemination of metallo-beta-lactamase (MBL) producing gram-negative bacilli is of great concern because MBL can hydrolyze carbapenem. We report herein the infection by VIM-2 type MBL producing Achromobacter xylosoxidans...
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Distribution of Pathogenic Genes and Molecular Typing of Yersinia pseudotuberculosis Isolated from Spring Water in Seoul

Kim MS, Lee YK, Kim KS, Song MO, Shim MJ

  • KMID: 2055004
  • J Bacteriol Virol.
  • 2004 Jun;34(2):121-128.
In order to investigate pathogenic genes and genetic relationships of Y. pseudotuberculosis strains, We isolated 9 strains of Y. pseudotuberculosis from 380 spring water sites in Seoul from 2000 to...
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Epidemiological Study and Virulence Associated Genes of Enteropathogenic Escherichia coli Isolated from Diarrheal Neonates

Kim YB, Moon JY, Lee EJ, Park JH

  • KMID: 2054969
  • J Bacteriol Virol.
  • 2003 Dec;33(4):265-275.
A total of 136 strains of Escherichia coli, isolated from rectal swabs of neonates at the neonatal intensive care unit of Pusan National University Hospital during the period from February...
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A Molecular Epidemiologic Study by Plasmid DNA and Random Amplified Polymorphic DNA Analyses of Salmonella enterica serotype Enteritidis Isolated in Food Borne Outbreaks in Gwangju, 1997

Yang SC, Bae M, Kim SH, Chung JK, Ha DR, Won YJ, Chung SS, Ryu PY

  • KMID: 2170072
  • Infect Chemother.
  • 2003 Oct;35(5):289-297.
BACKGROUND: During the past 10 years, there has been an increased incidence of gastrointestinal infections caused by salmonellae in Korea. In 1999, there were several outbreaks and sporadic occurrences of...
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