- Description of eight new mitochondrial genomes for the genus Neoarius and phylogenetic considerations for the family Ariidae (Siluriformes)
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Pimentel LGP, da Silva IB, Rodrigues-Oliveira IH, Pasa R, Menegídio FB, Kavalco KF
- KMID: 2550892
- Genomics Inform.
- 2023 Dec;21(4):e51.
- doi: 10.5808/gi.23059
The genus Neoarius, known as marine catfish, is a group of the family Ariidae, composed of 10 species found in Oceania. None of the species in this genus have their... -
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- Comparative analysis of HiSeq3000 and BGISEQ-500 sequencing platform over whole genome sequencing metagenomics data
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Kumar A, Robertsen EM, Willassen NP, Fu J, Hjerde E
- KMID: 2550890
- Genomics Inform.
- 2023 Dec;21(4):e49.
- doi: 10.5808/gi.23072
Recent advances in sequencing technologies and platforms have enabled to generate metagenomics sequences using different sequencing platforms. In this study, we analyzed and compared shotgun metagenomic sequences generated by HiSeq3000... -
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- Identification of key genes and functional enrichment analysis of liver fibrosis in nonalcoholic fatty liver disease through weighted gene co-expression network analysis
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Hu Y, Zhou J
- KMID: 2550886
- Genomics Inform.
- 2023 Dec;21(4):e45.
- doi: 10.5808/gi.23051
Nonalcoholic fatty liver disease (NAFLD) is a common type of chronic liver disease, with severity levels ranging from nonalcoholic fatty liver to nonalcoholic steatohepatitis (NASH). The extent of liver fibrosis... -
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- Genome-wide SNP analysis provides insights into the XX/XY sex-determination system in silver barb (Barbonymus gonionotus)
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Chailertrit V, Panthum T, Kongkaew L, Chalermwong P, Singchat W, Ahmad SF, Kraichak E, Muangmai N, Duengkae P, Peyachoknagul S, Han K, Srikulnath K
- KMID: 2550888
- Genomics Inform.
- 2023 Dec;21(4):e47.
- doi: 10.5808/gi.23075
Silver barb (Barbonymus gonionotus) is among the most economically important freshwater fish species in Thailand. It ranks fourth in economic value and third in production weight for fisheries and culture... -
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- An analysis of the waning effect of COVID-19 vaccinations
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Lee B, Song H, Apio C, Han K, Park J, Liu Z, Xuwen H, Park T
- KMID: 2550891
- Genomics Inform.
- 2023 Dec;21(4):e50.
- doi: 10.5808/gi.23088
Vaccine development is one of the key efforts to control the spread of coronavirus disease 2019 (COVID-19). However, it has become apparent that the immunity acquired through vaccination is not... -
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- Expression of anoctamin 7 (ANO7) is associated with poor prognosis and mucin 2 (MUC2) in colon adenocarcinoma: a study based on TCGA data
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Chen C, Aluksanasuwan S, Somsuan K
- KMID: 2550887
- Genomics Inform.
- 2023 Dec;21(4):e46.
- doi: 10.5808/gi.23071
Colon adenocarcinoma (COAD) is the predominant type of colorectal cancer. Early diagnosis and treatment can significantly improve the prognosis of COAD patients. Anoctamin 7 (ANO7), an anion channel protein, has... -
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- Unraveling the hypoxia modulating potential of VEGF family genes in pan-cancer
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Bae SH, Hwang T, Han MR
- KMID: 2550885
- Genomics Inform.
- 2023 Dec;21(4):e44.
- doi: 10.5808/gi.23061
Tumor hypoxia, oxygen deprivation state, occurs in most cancers and promotes angiogenesis, enhancing the potential for metastasis. The vascular endothelial growth factor (VEGF) family genes play crucial roles in tumorigenesis... -
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- A genomic and bioinformatic-based approach to identify genetic variants for liver cancer across multiple continents
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Ma’ruf M, Irham LM, Adikusuma W, Sarasmita MA, Khairi S, Purwanto BD, Chong R, Mazaya M, Siswanto LMH
- KMID: 2550889
- Genomics Inform.
- 2023 Dec;21(4):e48.
- doi: 10.5808/gi.23067
Liver cancer is the fourth leading cause of death worldwide. Well-known risk factors include hepatitis B virus and hepatitis C virus, along with exposure to aflatoxins, excessive alcohol consumption, obesity,... -
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- Comparison of microbial molecular diagnosis efficiency within unstable template metagenomic DNA samples between qRT-PCR and chip-based digital PCR platforms
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Kim D, Jeon J, Kim M, Jeong J, Heo YM, Lee DG, Yon DK, Han K
- KMID: 2550893
- Genomics Inform.
- 2023 Dec;21(4):e52.
- doi: 10.5808/gi.23068
Accurate and efficient microbial diagnosis is crucial for effective molecular diagnostics, especially in the field of human healthcare. The gold standard equipment widely employed for detecting specific microorganisms in molecular... -
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