- Editor's Introduction to This Issue (G&I 15:1, 2017)
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Chung YJ
- KMID: 2375578
- Genomics Inform.
- 2017 Mar;15(1):1-1.
- doi: 10.5808/GI.2017.15.1.1
No abstract available. -
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- TRAPR: R Package for Statistical Analysis and Visualization of RNA-Seq Data
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Lim JH, Lee SY, Kim JH
- KMID: 2375585
- Genomics Inform.
- 2017 Mar;15(1):51-53.
- doi: 10.5808/GI.2017.15.1.51
High-throughput transcriptome sequencing, also known as RNA sequencing (RNA-Seq), is a standard technology for measuring gene expression with unprecedented accuracy. Numerous bioconductor packages have been developed for the statistical analysis... -
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- A ChIP-Seq Data Analysis Pipeline Based on Bioconductor Packages
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Park SJ, Kim JH, Yoon BH, Kim SY
- KMID: 2375580
- Genomics Inform.
- 2017 Mar;15(1):11-18.
- doi: 10.5808/GI.2017.15.1.11
Nowadays, huge volumes of chromatin immunoprecipitation-sequencing (ChIP-Seq) data are generated to increase the knowledge on DNA-protein interactions in the cell, and accordingly, many tools have been developed for ChIP-Seq analysis.... -
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- Use of Graph Database for the Integration of Heterogeneous Biological Data
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Yoon BH, Kim SK, Kim SY
- KMID: 2375581
- Genomics Inform.
- 2017 Mar;15(1):19-27.
- doi: 10.5808/GI.2017.15.1.19
Understanding complex relationships among heterogeneous biological data is one of the fundamental goals in biology. In most cases, diverse biological data are stored in relational databases, such as MySQL and... -
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- Comparative Analysis of Predicted Gene Expression among Crenarchaeal Genomes
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Das S, Chottopadhyay B, Sahoo S
- KMID: 2375583
- Genomics Inform.
- 2017 Mar;15(1):38-47.
- doi: 10.5808/GI.2017.15.1.38
Research into new methods for identifying highly expressed genes in anonymous genome sequences has been going on for more than 15 years. We presented here an alternative approach based on... -
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- DNA Methylation Profiles of Blood Cells Are Distinct between Early-Onset Obese and Control Individuals
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Rhee JK, Lee JH, Yang HK, Kim TM, Yoon KH
- KMID: 2375582
- Genomics Inform.
- 2017 Mar;15(1):28-37.
- doi: 10.5808/GI.2017.15.1.28
Obesity is a highly prevalent, chronic disorder that has been increasing in incidence in young patients. Both epigenetic and genetic aberrations may play a role in the pathogenesis of obesity.... -
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- Circulating Tumor DNA in a Breast Cancer Patient's Plasma Represents Driver Alterations in the Tumor Tissue
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Lee J, Cho SM, Kim MS, Lee SH, Chung YJ, Jung SH
- KMID: 2375584
- Genomics Inform.
- 2017 Mar;15(1):48-50.
- doi: 10.5808/GI.2017.15.1.48
Tumor tissues from biopsies or surgery are major sources for the next generation sequencing (NGS) study, but these procedures are invasive and have limitation to overcome intratumor heterogeneity. Recent studies... -
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- Evaluation of Digital PCR as a Technique for Monitoring Acute Rejection in Kidney Transplantation
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Lee H, Park YM, We YM, Han DJ, Seo JW, Moon H, Lee YH, Kim YG, Moon JY, Lee SH, Lee JK
- KMID: 2375579
- Genomics Inform.
- 2017 Mar;15(1):2-10.
- doi: 10.5808/GI.2017.15.1.2
Early detection and proper management of kidney rejection are crucial for the long-term health of a transplant recipient. Recipients are normally monitored by serum creatinine measurement and sometimes with graft... -
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