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ORF Miner: a Web-based ORF Search Tool

Park SG, Kim KB

  • KMID: 2166470
  • Genomics Inform.
  • 2009 Dec;7(4):217-219.
The primary clue for locating protein-coding regions is the open reading frame and the determination of ORFs (Open Reading Frames) is the first step toward the gene prediction, especially for...
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WebChemDB: An Integrated Chemical Database Retrieval System

Hou BK, Moon EJ, Moon SC, Kim HJ

  • KMID: 2166469
  • Genomics Inform.
  • 2009 Dec;7(4):212-216.
WebChemDB is an integrated chemical database retrieval system that provides access to over 8 million publicly available chemical structures, including related information on their biological activities and direct links to...
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IdMapper: A Java Application for ID Mapping across Multiple Cross-referencing Providers

Lee H, Kim H, Yu U

  • KMID: 2166468
  • Genomics Inform.
  • 2009 Dec;7(4):208-211.
We developed an identifier mapping application for bioinformatics research in Java programming language. It is easy to use and provides many usability functionalities that are expected as essentials for a...
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Rapamycin-Induced Abundance Changes in the Proteome of Budding Yeast

Shin CS, Chang YJ, Lee HG, Huh WK

  • KMID: 2166467
  • Genomics Inform.
  • 2009 Dec;7(4):203-207.
The target of rapamycin (TOR) signaling pathway conserved from yeast to human plays critical roles in regulation of eukaryotic cell growth. It has been shown that TOR pathway is involved...
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Lack of Association of BIRC5 Polymorphisms with Clearance of HBV Infection and HCC Occurrence in a Korean Population

Lee JS, Kim JH, Park BL, Cheong HS, Kim JY, Park TJ, Chun JY, Bae JS, Lee HS, Kim YJ, Shin HD

  • KMID: 2166466
  • Genomics Inform.
  • 2009 Dec;7(4):195-202.
BIRC5 (Survivin) belongs to the inhibitor of apoptosis gene family. The BIRC5 protein inhibits caspases and consequently blocks apoptosis. Thus, BIRC5 contributes to the progression of cancer allowing for continued...
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Identification of Polymorphisms in CYP2E1 Gene and Association Analysis among Chronic HBV Patients

Chun JY, Park BL, Cheong HS, Kim JY, Park TJ, Lee JS, Lee HS, Kim YJ, Shin HD

  • KMID: 2166465
  • Genomics Inform.
  • 2009 Dec;7(4):187-194.
Cytochrome P450 2E1 (CYP2E1) is a member of the cytochrome P450 superfamily, and it is a key enzyme responsible for the metabolic activation of many smallmolecular-weight compounds such as alcohol,...
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RNA Mapping of Mutant Myotonic Dystrophy Protein Kinase 3'-Untranslated Region Transcripts

Song MS, Lee SW

  • KMID: 2166464
  • Genomics Inform.
  • 2009 Dec;7(4):181-186.
Myotonic dystrophy type 1 (DM1), which is a dominantly inherited neurodegenerative disorder, results from a CTG trinucleotide repeat expansion in the 3'-untranslated region (3'-UTR) of the myotonic dystrophy protein kinase...
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