- HExDB: Human EXon DataBase for Alternative Splicing Pattern Analysis
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Park J, Lee M, Bhak J
- KMID: 1572678
- Genomics Inform.
- 2005 Sep;3(3):80-85.
HExDB is a database for analyzing exon and splicing pattern information in Homo sapiens. HExDB is useful for specific purposes: 1) to design primers for exon amplification from cDNA and... -
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- Read-through Mutation in the Coat Protein ORF Suppresses Turnip Yellow Mosaic Virus Subgenomic RNA Accumulation
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Shin HI, Cho TJ
- KMID: 1782703
- J Bacteriol Virol.
- 2013 Mar;43(1):54-63.
- doi: 10.4167/jbv.2013.43.1.54
We have previously observed that a sequence in coat protein (CP) ORF of Turnip yellow mosaic virus (TYMV) is required for efficient replication of the virus. The sequence was predicted... -
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- Characterization of the Repeat Sequences of Varicella-Zoster Virus
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Won YH, Kim JI, Kim YY, Lee CH
- KMID: 1737321
- J Bacteriol Virol.
- 2014 Dec;44(4):326-335.
- doi: 10.4167/jbv.2014.44.4.326
Varicella-zoster virus (VZV) is a causative agent for shingles and herpes zoster. The genomes of VZV contain five reiteration (R) sequences and an origin of replication (ORI) sequences composed of... -
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- ORF Miner: a Web-based ORF Search Tool
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Park SG, Kim KB
- KMID: 2166470
- Genomics Inform.
- 2009 Dec;7(4):217-219.
The primary clue for locating protein-coding regions is the open reading frame and the determination of ORFs (Open Reading Frames) is the first step toward the gene prediction, especially for... -
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- A Sequence in Coat Protein Open Reading Frame Is Required for Turnip Yellow Mosaic Virus Replication
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Shin HI, Cho TJ
- KMID: 2168628
- J Bacteriol Virol.
- 2011 Jun;41(2):109-116.
- doi: 10.4167/jbv.2011.41.2.109
Turnip yellow mosaic virus (TYMV) is a spherical plant virus that has a single 6.3 kb positive strand RNA genome. Information for TYMV replication is limited, except that the 3'-terminal... -
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- Isolation and characterization of orf viruses from Korean black goats
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Oem JK, Chung JY, Kim YJ, Lee KK, Kim SH, Jung BY, Hyun BH
- KMID: 1705526
- J Vet Sci.
- 2013 Jun;14(2):227-230.
- doi: 10.4142/jvs.2013.14.2.227
Five cases of orf virus infection in Korean black goats were diagnosed in our laboratory between 2010 and 2011. One orf virus (ORF/2011) was isolated from an ovine testis cell... -
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- Characterization of a Replication Element in the Coat Protein ORF of Turnip Yellow Mosaic Virus
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Shin HI, Cho TJ
- KMID: 1434772
- J Bacteriol Virol.
- 2012 Mar;42(1):49-55.
- doi: 10.4167/jbv.2012.42.1.49
Turnip yellow mosaic virus (TYMV) is a non-enveloped icosahedral virus that has a single 6.3 kb positive-strand RNA as a genome. Previously, it was observed that the recombinant construct TY-eGFP2,... -
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- A Small Cryptic Plasmid pZMO1 of Zymomonas mobilis ATCC10988
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Kang HL, Kang HS
- KMID: 1973996
- Genomics Inform.
- 2003 Sep;1(1):55-60.
The nucleotide sequence of pZMO1, a small cryptic plasmid of Zymomonas mobilis ATCC10988 was determined. Analysis of 1,680 bp of sequence revealed 69% identity with Shigella sonnei plasmid, pKYM and... -
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- Genome Sequencing of Human Cytomegalovirus Strain LCW and Identification of Asia-specific Cluster
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Kang JH, Yoon JH, Hwang HR, Lee CH
- KMID: 2452067
- J Bacteriol Virol.
- 2018 Dec;48(4):147-155.
- doi: 10.4167/jbv.2018.48.4.147
Human cytomegalovirus (HCMV) is a ubiquitous human pathogen and contains double stranded DNA genome with approximately 230 kbp. Molecular genomic studies of HCMV have been attempted in order to understand... -
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- N-terminal Extension of Coat Protein of Turnip Yellow Mosaic Virus has Variable Effects on Replication, RNA Packaging, and Virion Assembly Depending on the Inserted Sequence
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Chae KH, Kim D, Cho TJ
- KMID: 2168738
- J Bacteriol Virol.
- 2016 Mar;46(1):13-21.
- doi: 10.4167/jbv.2016.46.1.13
Turnip yellow mosaic virus (TYMV) is a non-enveloped icosahedral virus composed of 20 kDa single coat proteins. In this study, we modified the TYMV coat protein (CP) ORF by inserting... -
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- The Role of HPV16 E6 Protein on Matrix Metalloproteinase 2 and 9 Expressions in Human Embryo Skin Fibroblast Cell
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Shin JW, Kang JS
- KMID: 2272703
- Korean J Obstet Gynecol.
- 2005 Oct;48(10):2336-2344.
OBJECTIVE: The purpose of this study was to evaluate the role of HPV16 E6 protein on the expressions of MMP 2 and 9, major proteins associated with tumor invasion and... -
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- Morphological Transformation Region II (mtrII) of Human Cytomegalovirus
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Shin YM, Sohn SS, Kang JS, Chang SI, Lee IH
- KMID: 1906181
- J Korean Cancer Assoc.
- 1997 Jun;29(3):495-503.
PURPOSE: Human herpesviruses have been associated with the etiology of several human cancers. The role of these viruses in carcinogenesis has not yet been clarified. This study focused on identifying... -
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- The Role of Noncoding Region in Hantaan Viral S Genome for Expression of Nucleocapsid Protein
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Yu CH, Lee YS, Lee HD, Park C, Park KY, Lee PW
- KMID: 1896561
- J Korean Soc Virol.
- 2000 Mar;30(1):39-49.
The genome of Hantaan virus, the prototype of the hantavirus genus, is composed of three segmented, single stranded negative sense RNA genome. The 5' and 3' termini of the Hantaan... -
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- Purification of Protein Expressed from Three Different Regions of Norovirus (NoV)
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Kim JY, Choi JW, Park SW, Lee SG, Kim JM, Jheong WH, Kim DW, Kim JM, Sohn YS, Paik SY
- KMID: 1483964
- J Bacteriol Virol.
- 2008 Dec;38(4):235-237.
- doi: 10.4167/jbv.2008.38.4.235
Norovirus (NoV), which belongs to the family Caliciviridae, is one of the major causes of nonbacterial acute gastroenteritis in the world. In this study, we purified proteins from the epitope... -
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- Characterization of the Monoclonal Antibody Specific to Human S100A6 Protein
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Kim JW, Yoon SY, Joo JH, Kang HB, Lee YH, Choe YK, Choe IS
- KMID: 1571520
- Immune Netw.
- 2002 Sep;2(3):175-181.
- doi: 10.4110/in.2002.2.3.175
BACKGROUND: S100A6 is a calcium-binding protein overexpressed in several tumor cell lines including melanoma with high metastatic activity and involved in various cellular processes such as cell division and differentiation.... -
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- Sequencing analysis of the OFC1 gene on the nonsyndromic cleft lip and palate patient in Korean
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Kim SS, Son WS
- KMID: 1976490
- Korean J Orthod.
- 2003 Jun;33(3):185-197.
This study was performed to identify the characteristics of the OFC1 gene (locus: chromosome 6p24.3) in Korean patients, which is assumed to be the major gene behind the nonsyndromic cleft... -
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- Genotype of Varicella Zoster Virus Isolated from Korean Elderly Patients with Herpes Zoster
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Choi YJ, Kim KH, Oh MD
- KMID: 2170304
- Infect Chemother.
- 2010 Jun;42(3):162-170.
- doi: 10.3947/ic.2010.42.3.162
BACKGROUND: Herpes zoster develops via reactivation of the latent varicella zoster virus (VZV) in neuronal ganglia as host immunity declines. In Korea, seroprevalence of VZV is very high and population... -
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- Characterization of the Monoclonal Antibody Specific to Human S100A2 Protein
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Kim JW, Yoon SY, Kim JH, Joo JH, Kim JS, Lee Y, Yeom YI, Choe YK, Choe IS
- KMID: 2167966
- Immune Netw.
- 2003 Mar;3(1):16-22.
- doi: 10.4110/in.2003.3.1.16
BACKGROUND: The S100A2 gene, also known as S100L or CaN19, encodes a protein comprised of 99-amino acids, is a member of the calcium-binding proteins of EF-hand family. According to a... -
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- Effect of Prostate Specific Membrane Antigen on Angiogenesis
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Lee ST, Lee YG, Park HW
- KMID: 2293260
- Korean J Urol.
- 2004 Nov;45(11):1162-1166.
PURPOSE: PSMA (prostate specific membrane antigen) is a transmembrane glycoprotein, which is isolated from LNCaP. It is reported that PSMA is expressed in the vascular endothelium of various tumor. It... -
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- Detection of Human Herpesvirus 8 DNA Sequences in Classic Kaposi's Sarcoma, Premalignant and Malignant Cutaneous Epithelial Tumors
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Park SW, Park YH, Choi SM, Lee SS, Sung HS, Wang HY
- KMID: 2303246
- Korean J Dermatol.
- 2000 Jul;38(7):908-919.
BACKGROUND: Human herpesvirus 8 (HHV8) has been detected in all forms of Kaposi's sarcoma (KS). The role of HHV 8 in dermatologic diseases other than KS is controversial. Some studies... -
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